STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109964592E2F_TDP domain-containing protein. (336 aa)    
Predicted Functional Partners:
rb1
Retinoblastoma 1.
   
 0.971
tfdp1
Transcription factor.
   
 0.966
LOC109955333
E2F transcription factor 5.
  
  
 
0.907
e2f4
E2F transcription factor 4.
  
  
 
0.904
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.745
rbl1
Retinoblastoma-like 1 (p107).
   
 0.729
ENSMALP00000020381
Retinoblastoma-like 2 (p130).
   
 0.729
ENSMALP00000020404
RB_B domain-containing protein.
   
 0.729
smad3
Mothers against decapentaplegic homolog.
    
 0.716
LOC109961575
Mothers against decapentaplegic homolog.
    
 0.716
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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