Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccdc58 | timm21 | ENSMALP00000007564 | ENSMALP00000013561 | Coiled-coil domain containing 58. | Translocase of inner mitochondrial membrane 21. | 0.453 |
Ccdc58 | zzef1 | ENSMALP00000007564 | ENSMALP00000001700 | Coiled-coil domain containing 58. | Zinc finger, ZZ-type with EF hand domain 1. | 0.535 |
ENSMALP00000008637 | timm21 | ENSMALP00000008637 | ENSMALP00000013561 | Uncharacterized protein. | Translocase of inner mitochondrial membrane 21. | 0.453 |
ENSMALP00000008637 | zzef1 | ENSMALP00000008637 | ENSMALP00000001700 | Uncharacterized protein. | Zinc finger, ZZ-type with EF hand domain 1. | 0.535 |
ENSMALP00000023318 | timm21 | ENSMALP00000023318 | ENSMALP00000013561 | Katanin_con80 domain-containing protein. | Translocase of inner mitochondrial membrane 21. | 0.471 |
ENSMALP00000023318 | zzef1 | ENSMALP00000023318 | ENSMALP00000001700 | Katanin_con80 domain-containing protein. | Zinc finger, ZZ-type with EF hand domain 1. | 0.544 |
ENSMALP00000025003 | zzef1 | ENSMALP00000025003 | ENSMALP00000001700 | FtsJ domain-containing protein. | Zinc finger, ZZ-type with EF hand domain 1. | 0.565 |
LOC109968299 | zzef1 | ENSMALP00000006131 | ENSMALP00000001700 | RAN binding protein 2. | Zinc finger, ZZ-type with EF hand domain 1. | 0.605 |
immp1l | zzef1 | ENSMALP00000016818 | ENSMALP00000001700 | Mitochondrial inner membrane protease subunit. | Zinc finger, ZZ-type with EF hand domain 1. | 0.560 |
katnbl1 | timm21 | ENSMALP00000031601 | ENSMALP00000013561 | Katanin p80 subunit B-like 1. | Translocase of inner mitochondrial membrane 21. | 0.471 |
katnbl1 | zzef1 | ENSMALP00000031601 | ENSMALP00000001700 | Katanin p80 subunit B-like 1. | Zinc finger, ZZ-type with EF hand domain 1. | 0.544 |
med31 | zzef1 | ENSMALP00000031670 | ENSMALP00000001700 | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Zinc finger, ZZ-type with EF hand domain 1. | 0.622 |
timm21 | Ccdc58 | ENSMALP00000013561 | ENSMALP00000007564 | Translocase of inner mitochondrial membrane 21. | Coiled-coil domain containing 58. | 0.453 |
timm21 | ENSMALP00000008637 | ENSMALP00000013561 | ENSMALP00000008637 | Translocase of inner mitochondrial membrane 21. | Uncharacterized protein. | 0.453 |
timm21 | ENSMALP00000023318 | ENSMALP00000013561 | ENSMALP00000023318 | Translocase of inner mitochondrial membrane 21. | Katanin_con80 domain-containing protein. | 0.471 |
timm21 | katnbl1 | ENSMALP00000013561 | ENSMALP00000031601 | Translocase of inner mitochondrial membrane 21. | Katanin p80 subunit B-like 1. | 0.471 |
timm21 | zzef1 | ENSMALP00000013561 | ENSMALP00000001700 | Translocase of inner mitochondrial membrane 21. | Zinc finger, ZZ-type with EF hand domain 1. | 0.586 |
zfand4 | zzef1 | ENSMALP00000025970 | ENSMALP00000001700 | Zinc finger, AN1-type domain 4. | Zinc finger, ZZ-type with EF hand domain 1. | 0.474 |
zzef1 | Ccdc58 | ENSMALP00000001700 | ENSMALP00000007564 | Zinc finger, ZZ-type with EF hand domain 1. | Coiled-coil domain containing 58. | 0.535 |
zzef1 | ENSMALP00000008637 | ENSMALP00000001700 | ENSMALP00000008637 | Zinc finger, ZZ-type with EF hand domain 1. | Uncharacterized protein. | 0.535 |
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