STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbataThymus, brain and testes associated. (328 aa)    
Predicted Functional Partners:
ncln
Nicalin.
      
 0.616
LOC109955937
Zgc:109965.
      
 0.499
slc46a2
Solute carrier family 46 member 2.
   
  
 0.486
LOC109954487
GC-rich sequence DNA-binding factor 2.
      
 0.473
GET1
Guided entry of tail-anchored proteins factor 1.
      
 0.437
LOC109951880
Uncharacterized protein.
   
  
 0.426
LOC109951667
Serine protease 16.
   
  
 0.426
LOC109958942
Coiled-coil domain containing 114.
      
 0.407
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.