LOC109953786 protein (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC109953786

Uncharacterized protein. (323 aa)

Predicted Functional Partners:

Fancm

0.998

ENSMALP00000031185

0.830

LOC109965304

0.739

dut

0.736

SLC25A42

0.736

slc25a42

0.736

cenpm

0.734

cenpk

0.732

cenpn

0.731

faap24

0.731

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000031185	Fancm	ENSMALP00000031185	ENSMALP00000018889	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.462
ENSMALP00000031185	LOC109953786	ENSMALP00000031185	ENSMALP00000002031	Uncharacterized protein.	Uncharacterized protein.	0.830
ENSMALP00000031185	LOC109965304	ENSMALP00000031185	ENSMALP00000023353	Uncharacterized protein.	Uncharacterized protein.	0.939
ENSMALP00000031185	cenpk	ENSMALP00000031185	ENSMALP00000006205	Uncharacterized protein.	Centromere protein K.	0.958
ENSMALP00000031185	cenpm	ENSMALP00000031185	ENSMALP00000000258	Uncharacterized protein.	Proliferation associated nuclear element.	0.959
ENSMALP00000031185	cenpn	ENSMALP00000031185	ENSMALP00000003975	Uncharacterized protein.	Centromere protein N.	0.984
Fancm	ENSMALP00000031185	ENSMALP00000018889	ENSMALP00000031185	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.462
Fancm	LOC109953786	ENSMALP00000018889	ENSMALP00000002031	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.998
Fancm	SLC25A42	ENSMALP00000018889	ENSMALP00000028630	Helicase ATP-binding domain-containing protein.	Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.462
Fancm	dut	ENSMALP00000018889	ENSMALP00000017656	Helicase ATP-binding domain-containing protein.	Deoxyuridine triphosphatase.	0.462
Fancm	faap24	ENSMALP00000018889	ENSMALP00000022665	Helicase ATP-binding domain-containing protein.	FA core complex associated protein 24.	0.999
Fancm	slc25a42	ENSMALP00000018889	ENSMALP00000031441	Helicase ATP-binding domain-containing protein.	Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.462
LOC109953786	ENSMALP00000031185	ENSMALP00000002031	ENSMALP00000031185	Uncharacterized protein.	Uncharacterized protein.	0.830
LOC109953786	Fancm	ENSMALP00000002031	ENSMALP00000018889	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.998
LOC109953786	LOC109965304	ENSMALP00000002031	ENSMALP00000023353	Uncharacterized protein.	Uncharacterized protein.	0.739
LOC109953786	SLC25A42	ENSMALP00000002031	ENSMALP00000028630	Uncharacterized protein.	Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.736
LOC109953786	cenpk	ENSMALP00000002031	ENSMALP00000006205	Uncharacterized protein.	Centromere protein K.	0.732
LOC109953786	cenpm	ENSMALP00000002031	ENSMALP00000000258	Uncharacterized protein.	Proliferation associated nuclear element.	0.734
LOC109953786	cenpn	ENSMALP00000002031	ENSMALP00000003975	Uncharacterized protein.	Centromere protein N.	0.731
LOC109953786	dut	ENSMALP00000002031	ENSMALP00000017656	Uncharacterized protein.	Deoxyuridine triphosphatase.	0.736