STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109954800Transient receptor potential cation channel, subfamily M, member 6. (1989 aa)    
Predicted Functional Partners:
nudt9
Nudix (nucleoside diphosphate linked moiety X)-type motif 9.
 
   
 0.723
LOC109960455
Transient receptor potential cation channel, subfamily V, member 1; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.586
LOC109971982
Solute carrier family 41 member 1.
      
 0.571
cnnm2
Cyclin and CBS domain divalent metal cation transport mediator 2b.
    
 
 0.567
cnnm3
Uncharacterized protein.
    
 
 0.563
trpv4
Transient receptor potential cation channel, subfamily V, member 4; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.493
LOC109961460
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.474
trpa1
Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.473
mrs2
Magnesium transporter.
      
 0.461
slc41a2
Solute carrier family 41 member 2b.
      
 0.459
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.