Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSMALP00000028058 | ENSMALP00000029717 | ENSMALP00000028058 | ENSMALP00000029717 | Si:zfos-452g4.1. | Uncharacterized protein. | 0.921 |
ENSMALP00000028058 | LOC109953177 | ENSMALP00000028058 | ENSMALP00000010780 | Si:zfos-452g4.1. | Uncharacterized protein. | 0.702 |
ENSMALP00000028058 | LOC109956759 | ENSMALP00000028058 | ENSMALP00000005723 | Si:zfos-452g4.1. | Centrin 4. | 0.702 |
ENSMALP00000028058 | LOC109958495 | ENSMALP00000028058 | ENSMALP00000003982 | Si:zfos-452g4.1. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.857 |
ENSMALP00000028058 | LOC109968403 | ENSMALP00000028058 | ENSMALP00000010905 | Si:zfos-452g4.1. | Centrin, EF-hand protein, 2. | 0.702 |
ENSMALP00000028058 | crppa | ENSMALP00000028058 | ENSMALP00000009852 | Si:zfos-452g4.1. | CDP-L-ribitol pyrophosphorylase A. | 0.702 |
ENSMALP00000028058 | eny2 | ENSMALP00000028058 | ENSMALP00000022612 | Si:zfos-452g4.1. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.857 |
ENSMALP00000028058 | leng8 | ENSMALP00000028058 | ENSMALP00000013304 | Si:zfos-452g4.1. | Leukocyte receptor cluster (LRC) member 8. | 0.412 |
ENSMALP00000028058 | pcid2 | ENSMALP00000028058 | ENSMALP00000002471 | Si:zfos-452g4.1. | PCI domain containing 2. | 0.923 |
ENSMALP00000029717 | ENSMALP00000028058 | ENSMALP00000029717 | ENSMALP00000028058 | Uncharacterized protein. | Si:zfos-452g4.1. | 0.921 |
ENSMALP00000029717 | LOC109953177 | ENSMALP00000029717 | ENSMALP00000010780 | Uncharacterized protein. | Uncharacterized protein. | 0.663 |
ENSMALP00000029717 | LOC109956759 | ENSMALP00000029717 | ENSMALP00000005723 | Uncharacterized protein. | Centrin 4. | 0.421 |
ENSMALP00000029717 | LOC109958495 | ENSMALP00000029717 | ENSMALP00000003982 | Uncharacterized protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.704 |
ENSMALP00000029717 | LOC109968403 | ENSMALP00000029717 | ENSMALP00000010905 | Uncharacterized protein. | Centrin, EF-hand protein, 2. | 0.421 |
ENSMALP00000029717 | crppa | ENSMALP00000029717 | ENSMALP00000009852 | Uncharacterized protein. | CDP-L-ribitol pyrophosphorylase A. | 0.421 |
ENSMALP00000029717 | eny2 | ENSMALP00000029717 | ENSMALP00000022612 | Uncharacterized protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.704 |
ENSMALP00000029717 | leng8 | ENSMALP00000029717 | ENSMALP00000013304 | Uncharacterized protein. | Leukocyte receptor cluster (LRC) member 8. | 0.904 |
ENSMALP00000029717 | mcm3ap | ENSMALP00000029717 | ENSMALP00000021969 | Uncharacterized protein. | Minichromosome maintenance complex component 3 associated protein. | 0.962 |
ENSMALP00000029717 | pcid2 | ENSMALP00000029717 | ENSMALP00000002471 | Uncharacterized protein. | PCI domain containing 2. | 0.971 |
LOC109953177 | ENSMALP00000028058 | ENSMALP00000010780 | ENSMALP00000028058 | Uncharacterized protein. | Si:zfos-452g4.1. | 0.702 |
page 1 of 5