STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfand5Zinc finger, AN1-type domain 5a. (217 aa)    
Predicted Functional Partners:
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
   
 0.751
rabep2
Rabaptin, RAB GTPase binding effector protein 2.
   
 0.748
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.611
rps27a
Ribosomal protein S27a.
    
 0.605
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.503
rab21
RAB21, member RAS oncogene family.
   
 
 0.483
rab24
RAB24, member RAS oncogene family.
   
 0.443
ENSMALP00000022625
Uncharacterized protein.
     
 0.435
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.433
LOC109957877
Uncharacterized protein.
    
 0.433
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.