STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hhipHedgehog interacting protein. (698 aa)    
Predicted Functional Partners:
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.985
ihh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.983
LOC109964396
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.983
dhh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.981
ptch1
Patched 1.
    
 
 0.710
ENSMALP00000028800
Uncharacterized protein.
    
 0.702
ptch2
Patched 2.
    
 
 0.617
LOC109970136
GLI family zinc finger 3.
      
 0.604
gli2
Uncharacterized protein.
      
 0.604
gli1
GLI family zinc finger 1.
      
 0.604
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.