STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk25Serine/threonine kinase 25b. (423 aa)    
Predicted Functional Partners:
lrsam1
Leucine rich repeat and sterile alpha motif containing 1.
   
 
 0.839
LOC109972684
MOB family member 4, phocein.
    
 
 0.699
LOC109960334
Programmed cell death 10a.
    
 
 0.683
LOC109952075
Programmed cell death 10b.
    
 
 0.683
LOC109955680
Calcium binding protein 39-like.
    
 
 0.650
LOC109957574
Calcium binding protein 39, like 1.
    
 
 0.650
cab39
Calcium binding protein 39.
    
 
 0.650
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
   
 
 0.647
ENSMALP00000019651
CortBP2 domain-containing protein.
    
 
 0.639
strip1
Striatin interacting protein 1.
    
 
 0.633
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.