Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109953999 | LOC109964733 | ENSMALP00000005914 | ENSMALP00000006030 | Uncharacterized protein. | NADH:ubiquinone oxidoreductase subunit A5. | 0.902 |
LOC109953999 | atox1 | ENSMALP00000005914 | ENSMALP00000003930 | Uncharacterized protein. | Antioxidant 1 copper chaperone. | 0.877 |
LOC109953999 | rrn3 | ENSMALP00000005914 | ENSMALP00000004849 | Uncharacterized protein. | RRN3 homolog, RNA polymerase I transcription factor. | 0.796 |
LOC109953999 | uba52 | ENSMALP00000005914 | ENSMALP00000025854 | Uncharacterized protein. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.810 |
LOC109964733 | LOC109953999 | ENSMALP00000006030 | ENSMALP00000005914 | NADH:ubiquinone oxidoreductase subunit A5. | Uncharacterized protein. | 0.902 |
LOC109964733 | atox1 | ENSMALP00000006030 | ENSMALP00000003930 | NADH:ubiquinone oxidoreductase subunit A5. | Antioxidant 1 copper chaperone. | 0.877 |
LOC109964733 | rrn3 | ENSMALP00000006030 | ENSMALP00000004849 | NADH:ubiquinone oxidoreductase subunit A5. | RRN3 homolog, RNA polymerase I transcription factor. | 0.871 |
LOC109964733 | uba52 | ENSMALP00000006030 | ENSMALP00000025854 | NADH:ubiquinone oxidoreductase subunit A5. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.916 |
LOC109968762 | SOD3 | ENSMALP00000001265 | ENSMALP00000004675 | ATPase copper transporting beta. | Superoxide dismutase 3. | 0.551 |
LOC109968762 | atox1 | ENSMALP00000001265 | ENSMALP00000003930 | ATPase copper transporting beta. | Antioxidant 1 copper chaperone. | 0.970 |
LOC109968762 | ccs | ENSMALP00000001265 | ENSMALP00000022181 | ATPase copper transporting beta. | Copper chaperone for superoxide dismutase. | 0.993 |
LOC109968762 | sod1 | ENSMALP00000001265 | ENSMALP00000019762 | ATPase copper transporting beta. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.551 |
SOD3 | LOC109968762 | ENSMALP00000004675 | ENSMALP00000001265 | Superoxide dismutase 3. | ATPase copper transporting beta. | 0.551 |
SOD3 | atox1 | ENSMALP00000004675 | ENSMALP00000003930 | Superoxide dismutase 3. | Antioxidant 1 copper chaperone. | 0.762 |
SOD3 | atp7a | ENSMALP00000004675 | ENSMALP00000006228 | Superoxide dismutase 3. | ATPase copper transporting alpha. | 0.551 |
SOD3 | ccs | ENSMALP00000004675 | ENSMALP00000022181 | Superoxide dismutase 3. | Copper chaperone for superoxide dismutase. | 0.976 |
atox1 | LOC109953999 | ENSMALP00000003930 | ENSMALP00000005914 | Antioxidant 1 copper chaperone. | Uncharacterized protein. | 0.877 |
atox1 | LOC109964733 | ENSMALP00000003930 | ENSMALP00000006030 | Antioxidant 1 copper chaperone. | NADH:ubiquinone oxidoreductase subunit A5. | 0.877 |
atox1 | LOC109968762 | ENSMALP00000003930 | ENSMALP00000001265 | Antioxidant 1 copper chaperone. | ATPase copper transporting beta. | 0.970 |
atox1 | SOD3 | ENSMALP00000003930 | ENSMALP00000004675 | Antioxidant 1 copper chaperone. | Superoxide dismutase 3. | 0.762 |
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