STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109957992ATP-binding cassette, sub-family C (CFTR/MRP), member 6a. (1463 aa)    
Predicted Functional Partners:
LOC109964730
ATP-binding cassette, sub-family C (CFTR/MRP), member 1.
  
  
 
0.902
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.610
gopc
Golgi-associated PDZ and coiled-coil motif containing.
   
 0.539
usp10
Ubiquitin carboxyl-terminal hydrolase.
    
  0.517
LOC109953576
ATP-binding cassette, sub-family G (WHITE), member 2c.
  
0.509
ENSMALP00000006634
ATP-binding cassette, sub-family G (WHITE), member 2a.
  
 0.509
derl1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.493
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
0.486
abcb6
ATP-binding cassette, sub-family B (MDR/TAP), member 6a.
    
0.480
derl2
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.466
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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