STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pudpPseudouridine 5'-phosphatase. (236 aa)    
Predicted Functional Partners:
pgghg
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.970
LOC109965709
Serine--pyruvate aminotransferase.
    
 0.939
LOC109957789
Alanine--glyoxylate and serine--pyruvate aminotransferase b.
    
 0.939
yipf6
Protein YIPF.
    
 0.917
mpi
Mannose phosphate isomerase.
   
 0.913
yrdc
YrdC N(6)-threonylcarbamoyltransferase domain containing.
  
 
  0.882
galt
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
    
 0.879
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.876
LOC109969149
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.876
adhfe1
Alcohol dehydrogenase iron containing 1.
    
 0.869
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.