STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109953904Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
poc1a
POC1 centriolar protein A.
    
 0.583
cystm1
Uncharacterized protein.
    
 0.578
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
    
 
 0.555
LOC109951234
NAD(P)H dehydrogenase, quinone 1.
      
 0.529
dmrt3
Doublesex and mab-3 related transcription factor 3a.
    
 0.508
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.447
ENSMALP00000017269
Zinc finger and BTB domain containing 16b.
 
      0.439
LOC109951421
Doublesex and mab-3 related transcription factor 1.
    
 0.437
fbxl17
F-box and leucine-rich repeat protein 17.
   
 
 0.401
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.