STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109958971PR domain containing 2, with ZNF domain b. (1635 aa)    
Predicted Functional Partners:
LOC109970103
C-type lectin domain-containing protein.
    
 0.734
LOC109968954
Uncharacterized protein.
    
 0.734
Camkmt
Si:ch73-54n14.2.
     
 0.684
LOC109955240
C-type lectin domain-containing protein.
    
 0.659
LOC109955141
C-type lectin domain-containing protein.
    
 0.659
plod3
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
     
  0.650
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
     
  0.650
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
     
  0.650
ep300
E1A binding protein p300 b.
   
 
 0.454
LOC109952679
E1A binding protein p300 a.
   
 
 0.454
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.