STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF3Polycomb group ring finger 3. (249 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.891
RING1
Ring finger protein 1.
    
 0.891
rybp
RING1 and YY1 binding protein b.
    
 0.795
YAF2
YY1 associated factor 2.
    
 0.795
LOC109959842
RanBP2-type domain-containing protein.
    
 0.795
LOC109962705
Fibrosin.
    
 0.770
LOC109971676
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.706
LOC109958797
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.706
cpsf4
Cleavage and polyadenylation specific factor 4.
 
      0.692
LOC109954947
Lysine (K)-specific demethylase 2Ba.
   
 0.675
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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