STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppfibp1PPFIA binding protein 1b. (915 aa)    
Predicted Functional Partners:
LOC109967826
PTPRF interacting protein alpha 2.
   
0.579
LOC109961639
PTPRF interacting protein alpha 1.
   
0.579
PPFIA3
PTPRF interacting protein alpha 3.
   
0.579
LOC109956064
PTPRF interacting protein alpha 4.
   
0.579
cttn
Cortactin.
   
 0.573
KAZN
Kazrin, periplakin interacting protein a.
   
0.510
LOC109959015
Kazrin, periplakin interacting protein b.
   
0.510
LOC109963132
PTPRF interacting protein alpha 3.
   
0.510
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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