STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
criptCysteine-rich PDZ-binding protein. (107 aa)    
Predicted Functional Partners:
armc7
Armadillo repeat containing 7.
    
 
 0.841
phf5a
PHD finger protein 5A.
   
   0.809
prpf8
Pre-mRNA processing factor 8.
    
   0.804
LOC109963149
Ring finger protein 113A.
    
   0.804
sf3b3
Splicing factor 3b, subunit 3.
    
   0.804
sf3b2
Splicing factor 3b, subunit 2.
    
   0.804
sf3b1
Splicing factor 3b, subunit 1.
    
   0.804
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
    
 
 0.610
rbm48
RNA binding motif protein 48.
   
 
 0.596
cwc15
CWC15 spliceosome associated protein homolog.
   
   0.592
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.