STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109971164Nuclear receptor binding SET domain protein 1a. (1929 aa)    
Predicted Functional Partners:
eed
Embryonic ectoderm development.
   
 0.689
Mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.626
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.605
ENSMALP00000020279
Histone H2A; Belongs to the histone H2A family.
    
  0.597
ENSMALP00000024566
Histone H2A; Belongs to the histone H2A family.
    
  0.597
ENSMALP00000025092
Histone H2A; Belongs to the histone H2A family.
    
  0.597
ENSMALP00000032520
Histone H2A; Belongs to the histone H2A family.
    
  0.597
rbbp5
Retinoblastoma binding protein 5.
    
 0.596
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.595
smg1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
 0.584
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.