STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lhx2LIM homeobox 2b. (417 aa)    
Predicted Functional Partners:
ldb1
LIM-domain binding 1b.
    
 0.691
ldb2
LIM domain binding 2a.
    
 0.691
LOC109961129
LIM domain binding 1a.
    
 0.691
gata4
GATA binding protein 4.
    
 0.588
sox10
SRY-box transcription factor 10.
    
 0.506
amh
Anti-Mullerian hormone.
    
 
 0.451
wnt4
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 
 0.434
LOC109955914
SRY-box transcription factor 3.
   
 0.428
LOC109964772
LIM domain only 1.
   
 
0.413
lmo3
LIM domain only 3.
   
 
0.413
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.