STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A1Solute carrier family 39 member 1. (340 aa)    
Predicted Functional Partners:
LOC109960981
Sorting and assembly machinery component 50 homolog, like.
    
 
 0.662
LOC109974977
SAMM50 sorting and assembly machinery component.
    
 
 0.662
mtx3
Metaxin.
    
 
 0.643
LOC109970910
Metaxin.
    
 
 0.643
SLC39A11
Solute carrier family 39 member 11.
   
 0.542
slc39a8
Solute carrier family 39 member 8.
   
 0.525
slc30a6
Solute carrier family 30 member 6.
   
 
 0.517
LOC109952809
Solute carrier family 39 member 7.
   
 0.506
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 
 0.497
slc39a13
Solute carrier family 39 member 13.
   
 0.469
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.