STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iqcb1IQ motif containing B1. (621 aa)    
Predicted Functional Partners:
cep290
Centrosomal protein 290.
    
 
 0.930
ENSMALP00000028022
Uncharacterized protein.
     
 0.799
rpgr
Retinitis pigmentosa GTPase regulator b.
   
 
 0.724
nphp1
Nephronophthisis 1.
    
 0.704
CALML6
Calmodulin like 6.
    
 0.670
ENSMALP00000012522
Uncharacterized protein.
    
 
 0.643
rab11a
RAB11a, member RAS oncogene family.
   
 0.631
LOC109974700
RAB11a, member RAS oncogene family, like.
   
 0.631
LOC109966991
RAB11B, member RAS oncogene family, a.
   
 0.631
ENSMALP00000031844
Uncharacterized protein.
   
 0.631
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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