Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109956837 | LOC109958871 | ENSMALP00000008609 | ENSMALP00000027898 | Si:dkey-237i9.8. | Platelet/endothelial cell adhesion molecule 1. | 0.900 |
LOC109956837 | LOC109967179 | ENSMALP00000008609 | ENSMALP00000010217 | Si:dkey-237i9.8. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.764 |
LOC109956837 | Sell | ENSMALP00000008609 | ENSMALP00000027795 | Si:dkey-237i9.8. | Uncharacterized protein. | 0.576 |
LOC109956837 | cd36 | ENSMALP00000008609 | ENSMALP00000020032 | Si:dkey-237i9.8. | CD36 molecule (thrombospondin receptor); Belongs to the CD36 family. | 0.594 |
LOC109956837 | cdh5 | ENSMALP00000008609 | ENSMALP00000031560 | Si:dkey-237i9.8. | Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. | 0.714 |
LOC109956837 | ctnnb1 | ENSMALP00000008609 | ENSMALP00000029712 | Si:dkey-237i9.8. | Catenin (cadherin-associated protein), beta 1. | 0.667 |
LOC109956837 | inpp5d | ENSMALP00000008609 | ENSMALP00000023598 | Si:dkey-237i9.8. | Inositol polyphosphate-5-phosphatase D. | 0.702 |
LOC109956837 | plcg1 | ENSMALP00000008609 | ENSMALP00000001048 | Si:dkey-237i9.8. | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. | 0.566 |
LOC109956837 | ptpn11 | ENSMALP00000008609 | ENSMALP00000027095 | Si:dkey-237i9.8. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.764 |
LOC109956837 | ptpn6 | ENSMALP00000008609 | ENSMALP00000032692 | Si:dkey-237i9.8. | Protein tyrosine phosphatase non-receptor type 6. | 0.766 |
LOC109958871 | LOC109956837 | ENSMALP00000027898 | ENSMALP00000008609 | Platelet/endothelial cell adhesion molecule 1. | Si:dkey-237i9.8. | 0.900 |
LOC109958871 | LOC109967179 | ENSMALP00000027898 | ENSMALP00000010217 | Platelet/endothelial cell adhesion molecule 1. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.764 |
LOC109958871 | Sell | ENSMALP00000027898 | ENSMALP00000027795 | Platelet/endothelial cell adhesion molecule 1. | Uncharacterized protein. | 0.576 |
LOC109958871 | cd36 | ENSMALP00000027898 | ENSMALP00000020032 | Platelet/endothelial cell adhesion molecule 1. | CD36 molecule (thrombospondin receptor); Belongs to the CD36 family. | 0.594 |
LOC109958871 | cdh5 | ENSMALP00000027898 | ENSMALP00000031560 | Platelet/endothelial cell adhesion molecule 1. | Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. | 0.714 |
LOC109958871 | ctnnb1 | ENSMALP00000027898 | ENSMALP00000029712 | Platelet/endothelial cell adhesion molecule 1. | Catenin (cadherin-associated protein), beta 1. | 0.667 |
LOC109958871 | inpp5d | ENSMALP00000027898 | ENSMALP00000023598 | Platelet/endothelial cell adhesion molecule 1. | Inositol polyphosphate-5-phosphatase D. | 0.702 |
LOC109958871 | plcg1 | ENSMALP00000027898 | ENSMALP00000001048 | Platelet/endothelial cell adhesion molecule 1. | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. | 0.566 |
LOC109958871 | ptpn11 | ENSMALP00000027898 | ENSMALP00000027095 | Platelet/endothelial cell adhesion molecule 1. | Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. | 0.764 |
LOC109958871 | ptpn6 | ENSMALP00000027898 | ENSMALP00000032692 | Platelet/endothelial cell adhesion molecule 1. | Protein tyrosine phosphatase non-receptor type 6. | 0.766 |
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