STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sigmar1Sigma non-opioid intracellular receptor 1. (222 aa)    
Predicted Functional Partners:
ENSMALP00000018723
Phosphoethanolamine methyltransferase.
   
 0.985
sqle
Squalene epoxidase a.
   
 
 0.977
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.974
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.942
LOC109958704
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 
 0.935
ENSMALP00000011280
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 
 0.935
dhcr7
7-dehydrocholesterol reductase.
   
 
 0.902
tm7sf2
Transmembrane 7 superfamily member 2.
   
 
 0.902
LOC109968075
Lamin B receptor.
   
 
 0.902
hsd3b7
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase; Belongs to the 3-beta-HSD family.
   
 
 0.846
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.