ENSMALP00000009302 protein (Monopterus albus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSMALP00000009302

SAP domain-containing protein. (51 aa)

Predicted Functional Partners:

LOC109972337

0.640

hnrnpk

0.640

LOC109967465

0.607

grsf1

0.570

hnrnph1

0.570

LOC109954475

0.570

ENSMALP00000022953

0.567

polr2f

0.558

LOC109971769

0.554

hnrnpll

0.554

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000009302	ENSMALP00000022953	ENSMALP00000009302	ENSMALP00000022953	SAP domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.567
ENSMALP00000009302	LOC109954475	ENSMALP00000009302	ENSMALP00000008127	SAP domain-containing protein.	Heterogeneous nuclear ribonucleoprotein H3.	0.570
ENSMALP00000009302	LOC109967465	ENSMALP00000009302	ENSMALP00000020436	SAP domain-containing protein.	Heterogeneous nuclear ribonucleoprotein M.	0.607
ENSMALP00000009302	LOC109971769	ENSMALP00000009302	ENSMALP00000011500	SAP domain-containing protein.	RRM domain-containing protein.	0.554
ENSMALP00000009302	LOC109972337	ENSMALP00000009302	ENSMALP00000005140	SAP domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K, like.	0.640
ENSMALP00000009302	grsf1	ENSMALP00000009302	ENSMALP00000000252	SAP domain-containing protein.	G-rich RNA sequence binding factor 1.	0.570
ENSMALP00000009302	hnrnph1	ENSMALP00000009302	ENSMALP00000005567	SAP domain-containing protein.	Heterogeneous nuclear ribonucleoprotein H1.	0.570
ENSMALP00000009302	hnrnpk	ENSMALP00000009302	ENSMALP00000014437	SAP domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K.	0.640
ENSMALP00000009302	hnrnpll	ENSMALP00000009302	ENSMALP00000016215	SAP domain-containing protein.	Uncharacterized protein.	0.554
ENSMALP00000009302	polr2f	ENSMALP00000009302	ENSMALP00000001946	SAP domain-containing protein.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.558
ENSMALP00000022953	ENSMALP00000009302	ENSMALP00000022953	ENSMALP00000009302	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	SAP domain-containing protein.	0.567
ENSMALP00000022953	LOC109954475	ENSMALP00000022953	ENSMALP00000008127	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Heterogeneous nuclear ribonucleoprotein H3.	0.689
ENSMALP00000022953	LOC109967465	ENSMALP00000022953	ENSMALP00000020436	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Heterogeneous nuclear ribonucleoprotein M.	0.752
ENSMALP00000022953	LOC109971769	ENSMALP00000022953	ENSMALP00000011500	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	RRM domain-containing protein.	0.608
ENSMALP00000022953	LOC109972337	ENSMALP00000022953	ENSMALP00000005140	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Heterogeneous nuclear ribonucleoprotein K, like.	0.726
ENSMALP00000022953	grsf1	ENSMALP00000022953	ENSMALP00000000252	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	G-rich RNA sequence binding factor 1.	0.673
ENSMALP00000022953	hnrnph1	ENSMALP00000022953	ENSMALP00000005567	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Heterogeneous nuclear ribonucleoprotein H1.	0.689
ENSMALP00000022953	hnrnpk	ENSMALP00000022953	ENSMALP00000014437	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Heterogeneous nuclear ribonucleoprotein K.	0.726
ENSMALP00000022953	hnrnpll	ENSMALP00000022953	ENSMALP00000016215	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Uncharacterized protein.	0.608
LOC109954475	ENSMALP00000009302	ENSMALP00000008127	ENSMALP00000009302	Heterogeneous nuclear ribonucleoprotein H3.	SAP domain-containing protein.	0.570