STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hivep3Human immunodeficiency virus type I enhancer binding protein 3b. (2001 aa)    
Predicted Functional Partners:
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.454
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
  
 
  0.454
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.454
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.447
ENSMALP00000026865
Zinc finger protein 217.
  
     0.445
LOC109951264
E3 ubiquitin-protein ligase.
    
 0.440
wwp1
E3 ubiquitin-protein ligase.
    
 0.440
LOC109966290
Uncharacterized protein.
  
  
  0.417
ENSMALP00000010863
Uncharacterized protein.
    
 0.411
foxh1
Forkhead box H1.
  
 
  0.411
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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