STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109951371Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (392 aa)    
Predicted Functional Partners:
LOC109971402
Aspartate beta-hydroxylase.
    
 0.947
LOC109972756
Un-named hu7910.
   
 0.940
ENSMALP00000008389
Uncharacterized protein.
    
  0.909
LOC109951982
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
  
  
 
0.901
LOC109955731
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
  
  
 
0.901
LOC109963283
Ryanodine receptor 1b (skeletal).
   
 0.733
RYR3
Uncharacterized protein.
   
 0.733
LOC109962306
Ryanodine receptor 3.
   
 0.733
ENSMALP00000020910
B30.2/SPRY domain-containing protein.
    
  0.671
LOC109964392
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.589
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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