LOC109951975 protein (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC109951975

Uncharacterized protein. (433 aa)

Predicted Functional Partners:

ENSMALP00000020195

0.860

ENSMALP00000008351

0.481

LOC109956225

0.415

ENSMALP00000029094

0.410

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000008351	LOC109951975	ENSMALP00000008351	ENSMALP00000011051	Kalirin RhoGEF kinase b.	Uncharacterized protein.	0.481
ENSMALP00000020195	LOC109951975	ENSMALP00000020195	ENSMALP00000011051	DH domain-containing protein.	Uncharacterized protein.	0.860
ENSMALP00000029094	LOC109951975	ENSMALP00000029094	ENSMALP00000011051	Uncharacterized protein.	Uncharacterized protein.	0.410
LOC109951975	ENSMALP00000008351	ENSMALP00000011051	ENSMALP00000008351	Uncharacterized protein.	Kalirin RhoGEF kinase b.	0.481
LOC109951975	ENSMALP00000020195	ENSMALP00000011051	ENSMALP00000020195	Uncharacterized protein.	DH domain-containing protein.	0.860
LOC109951975	ENSMALP00000029094	ENSMALP00000011051	ENSMALP00000029094	Uncharacterized protein.	Uncharacterized protein.	0.410
LOC109951975	LOC109956225	ENSMALP00000011051	ENSMALP00000014820	Uncharacterized protein.	Bridging integrator 2b.	0.415
LOC109956225	LOC109951975	ENSMALP00000014820	ENSMALP00000011051	Bridging integrator 2b.	Uncharacterized protein.	0.415