STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
micu3Mitochondrial calcium uptake family, member 3a. (484 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
   
0.871
micu2
Mitochondrial calcium uptake 2.
  
0.727
LOC109958449
Single-pass membrane protein with aspartate-rich tail 1b.
     
 0.722
smdt1
Single-pass membrane protein with aspartate-rich tail 1a.
     
 0.722
mcu
Mitochondrial calcium uniporter.
     
 0.711
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
     
 0.711
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.611
PHB2
Prohibitin.
    
  0.606
phb
Prohibitin.
    
  0.598
LOC109953014
Uncharacterized protein.
      
 0.485
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.