STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vwc2Von Willebrand factor C domain containing 2. (343 aa)    
Predicted Functional Partners:
nrn1
Neuritin 1a.
      
 0.576
prr35
Si:ch211-248l17.3.
      
 0.574
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.567
rrp36
Uncharacterized protein.
      
 0.548
TMEM43
Uncharacterized protein.
      
 0.534
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.526
ENSMALP00000012683
Uncharacterized protein.
      
 0.521
chrd
Chordin; Belongs to the chordin family.
      
 0.493
ccdc36
Uncharacterized protein.
      
 0.485
TOGARAM1
TOG array regulator of axonemal microtubules 1.
      
 0.478
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.