STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1150 aa)    
Predicted Functional Partners:
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.935
slu7
SLU7 homolog, splicing factor.
   
 0.921
cwc22
MI domain-containing protein.
   
 0.909
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.898
LOC109963758
UTP14C small subunit processome component.
   
 0.864
ddx49
DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; Belongs to the DEAD box helicase family.
   
 0.863
utp3
UTP3 small subunit processome component.
   
 0.861
yju2
YJU2 splicing factor homolog.
    
 0.850
utp25
UTP25 small subunit processor component.
   
 0.849
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 0.848
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.