STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109953237Uncharacterized protein. (617 aa)    
Predicted Functional Partners:
LOC109968986
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.961
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.961
LOC109961590
Uncharacterized protein.
    
 0.961
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.865
ENSMALP00000028800
Uncharacterized protein.
    
 
 0.863
igf2r
Insulin-like growth factor 2 receptor.
    
 
 0.840
rabep2
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.741
bace2
Beta-secretase 2; Belongs to the peptidase A1 family.
    
 0.613
BACE1
Beta-secretase 1; Belongs to the peptidase A1 family.
    
 0.613
zfand4
Zinc finger, AN1-type domain 4.
    
 0.531
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.