STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
josd2Josephin domain containing 2. (193 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
 0.925
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.913
LOC109974756
Uncharacterized protein.
   
 0.911
atxn3
Ataxin 3.
     
0.710
rad23a
RAD23 homolog A, nucleotide excision repair protein a.
   
 0.595
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.595
LOC109972195
Uncharacterized protein.
   
 0.595
ENSMALP00000007998
Ubiquitin-like domain-containing protein.
   
 0.591
LOC109957006
Ubiquitin like 4A.
   
 0.591
ENSMALP00000020237
ISG15 ubiquitin like modifier.
   
 0.591
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.