STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
poc5POC5 centriolar protein homolog (Chlamydomonas). (576 aa)    
Predicted Functional Partners:
LOC109953177
Uncharacterized protein.
    
 
 0.890
LOC109956759
Centrin 4.
    
 
 0.652
LOC109968403
Centrin, EF-hand protein, 2.
    
 
 0.652
ENSMALP00000012214
FAM161 centrosomal protein A.
    
 
 0.619
wdr90
WD repeat domain 90.
    
 
 0.601
wdr53
WD repeat domain 53.
   
    0.586
cep120
Centrosomal protein 120.
   
  
 0.582
iars2
Isoleucyl-tRNA synthetase 2, mitochondrial.
      
 0.582
ENSMALP00000031463
Spindle and centriole associated protein 1.
      
 0.580
sfi1
SFI1 centrin binding protein.
      
 0.579
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.