STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109951451Uncharacterized protein. (492 aa)    
Predicted Functional Partners:
LOC109962706
Thyroid hormone receptor alpha.
  
  
 
0.901
ENSMALP00000020004
GPS2_interact domain-containing protein.
    
 0.639
Ncor1
Uncharacterized protein.
    
 0.639
ncor2
Nuclear receptor corepressor 2.
    
 0.639
LOC109971684
Uncharacterized protein.
    
0.584
LOC109960693
Retinoid X receptor, alpha a.
    
0.584
RXRB
Uncharacterized protein.
    
0.584
LOC109964059
Uncharacterized protein.
    
0.584
LOC109965596
Nuclear receptor subfamily 1, group D, member 2a.
    
0.528
LOC109970345
Nuclear receptor subfamily 1, group D, member 4a.
    
0.528
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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