STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109967799Deoxyribonuclease; Belongs to the DNase I family. (268 aa)    
Predicted Functional Partners:
tbk1
TANK-binding kinase 1.
   
 0.802
ENSMALP00000029095
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.802
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.661
LOC109959637
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.616
LOC109971816
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.616
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.616
LOC109969783
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.616
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.616
LOC109963625
Interferon regulatory factor 3.
    
 0.595
LOC109959592
Ras-related GTP binding A.
   
 0.539
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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