STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109962613Apoptotic chromatin condensation inducer 1a. (1347 aa)    
Predicted Functional Partners:
sap18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 0.993
LOC109951543
RRM domain-containing protein.
   
 0.903
LOC109973213
RNA binding protein S1, serine-rich domain.
   
 0.903
ENSMALP00000021199
SAP domain-containing protein.
     
  0.900
pnn
Pinin, desmosome associated protein.
   
 0.881
magoh
Mago homolog, exon junction complex subunit.
    
 0.824
eif4a3
Eukaryotic translation initiation factor 4A3.
    
 0.822
pabpn1
Poly(A) binding protein, nuclear 1.
   
 0.778
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
   
 0.774
ENSMALP00000015404
PWI domain-containing protein.
   
 0.760
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.