STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109973588Uncharacterized protein. (289 aa)    
Predicted Functional Partners:
eloc
Skp1_POZ domain-containing protein.
    
 0.778
asb7
Ankyrin repeat and SOCS box containing 7.
  
 
0.773
LOC109973625
Ubiquitin-like domain-containing protein.
    
 0.728
commd8
COMM domain containing 8.
   
  0.633
commd4
COMM domain containing 4.
    
 0.618
commd2
COMM domain containing 2.
    
 0.617
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
0.607
commd9
COMM domain containing 9.
    
  0.604
COMMD10
COMM domain containing 10.
    
  0.604
LOC109957553
COMM domain containing 5.
    
  0.600
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.