STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fibcd1Fibrinogen C domain containing 1. (491 aa)    
Predicted Functional Partners:
ptx3
Pentraxin 3, long b.
    
 
 0.492
colec10
Collectin subfamily member 10.
   
 0.471
colec11
Collectin sub-family member 11.
   
 0.471
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.436
ENSMALP00000024612
Tenascin N.
 
   
  0.429
ENSMALP00000028273
THAP-type domain-containing protein.
    
  0.422
ENSMALP00000008063
Uncharacterized protein.
 
 
 
  0.415
C1QC
Complement C1q C chain.
   
 
 0.404
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.