STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nefhIF rod domain-containing protein; Belongs to the intermediate filament family. (798 aa)    
Predicted Functional Partners:
LOC109972756
Un-named hu7910.
   
 0.570
LOC109967259
ZP domain-containing protein.
   
 0.523
LOC109957374
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
 0.519
LOC109960733
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.519
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.424
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.418
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.418
LOC109971402
Aspartate beta-hydroxylase.
   
 0.415
wdr90
WD repeat domain 90.
   
 0.407
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.