STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109962670Uncharacterized protein. (272 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
  0.688
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
     
 0.533
rps27a
Ribosomal protein S27a.
    
  0.478
tomm20
Translocase of outer mitochondrial membrane 20b.
     
 0.465
LOC109951720
Zgc:109986.
     
 0.465
ccdc22
Coiled-coil domain containing 22.
   
 
  0.428
snx15
Sorting nexin 15.
      
 0.420
gak
Cyclin G associated kinase.
     
 0.409
commd9
COMM domain containing 9.
     
 0.405
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.