STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109969411RNA binding motif protein 10. (949 aa)    
Predicted Functional Partners:
SUGP1
SURP and G-patch domain containing 1.
   
 0.755
DHX15
DEAH-box helicase 15.
   
 0.630
LOC109966547
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 0.630
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.626
ddx10
RNA helicase.
    
 0.620
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 0.608
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.608
dqx1
DEAQ box RNA-dependent ATPase 1.
    
 0.608
ENSMALP00000025856
DEAH (Asp-Glu-Ala-His) box polypeptide 32b.
    
 0.608
ENSMALP00000028575
RRM domain-containing protein.
   
 
 0.608
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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