STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf143Zinc finger protein 143b. (627 aa)    
Predicted Functional Partners:
gtf2a2
General transcription factor IIA, 2.
     
 0.756
LOC109952318
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.706
sp1
Sp1 transcription factor.
    
 
0.686
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.683
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.658
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.658
gtf2b
General transcription factor IIB.
   
 0.641
polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.628
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 0.604
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.602
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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