STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDAC3Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (413 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.951
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.944
arid4a
AT rich interactive domain 4A (RBP1-like).
   
 0.944
ENSMALP00000028273
THAP-type domain-containing protein.
    
 0.941
ENSMALP00000020004
GPS2_interact domain-containing protein.
    
 0.931
Ncor1
Uncharacterized protein.
    
 0.931
ncor2
Nuclear receptor corepressor 2.
    
 0.931
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.883
LOC109974050
Transducin (beta)-like 1 X-linked receptor 1b.
   
 0.858
LOC109958103
Transducin beta like 1 X-linked.
   
 0.858
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (24%) [HD]