STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capslCalcyphosine-like b. (208 aa)    
Predicted Functional Partners:
lmbrd2
LMBR1 domain containing 2b.
 
 
  
 0.753
rsl24d1
Ribosomal L24 domain containing 1.
      
 0.570
ENSMALP00000016974
Family with sequence similarity 214 member A.
      
 0.563
RAI2
Retinoic acid induced 2.
      
 0.447
ENSMALP00000024553
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.446
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.446
mapk6
Mitogen-activated protein kinase 6.
    
 0.430
LOC109969387
BTB (POZ) domain containing 2b.
    
 
 0.419
efhc1
EF-hand domain (C-terminal) containing 1.
   
 
 0.409
pifo
Si:ch211-66i15.4.
   
  
 0.407
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.