Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atm | ENSMALP00000013776 | ENSMALP00000013808 | ENSMALP00000013776 | Uncharacterized protein. | TAN domain-containing protein. | 0.925 |
Atm | LOC109958648 | ENSMALP00000013808 | ENSMALP00000019033 | Uncharacterized protein. | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | 0.566 |
Atm | Mre11 | ENSMALP00000013808 | ENSMALP00000010641 | Uncharacterized protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.996 |
ENSMALP00000013776 | Atm | ENSMALP00000013776 | ENSMALP00000013808 | TAN domain-containing protein. | Uncharacterized protein. | 0.925 |
ENSMALP00000013776 | LOC109958648 | ENSMALP00000013776 | ENSMALP00000019033 | TAN domain-containing protein. | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | 0.566 |
ENSMALP00000013776 | Mre11 | ENSMALP00000013776 | ENSMALP00000010641 | TAN domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.969 |
LOC109958648 | Atm | ENSMALP00000019033 | ENSMALP00000013808 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | Uncharacterized protein. | 0.566 |
LOC109958648 | ENSMALP00000013776 | ENSMALP00000019033 | ENSMALP00000013776 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | TAN domain-containing protein. | 0.566 |
LOC109958648 | LOC109974331 | ENSMALP00000019033 | ENSMALP00000017105 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | SIX homeobox 5. | 0.608 |
LOC109958648 | LOC109974333 | ENSMALP00000019033 | ENSMALP00000017125 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | SIX homeobox 9. | 0.608 |
LOC109958648 | Mre11 | ENSMALP00000019033 | ENSMALP00000010641 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.633 |
LOC109958648 | hhex | ENSMALP00000019033 | ENSMALP00000014848 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | Homeobox domain-containing protein. | 0.569 |
LOC109958648 | hspb7 | ENSMALP00000019033 | ENSMALP00000011980 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | Heat shock protein family, member 7 (cardiovascular); Belongs to the small heat shock protein (HSP20) family. | 0.570 |
LOC109958648 | six1 | ENSMALP00000019033 | ENSMALP00000013349 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | SIX homeobox 1a. | 0.608 |
LOC109958648 | six2 | ENSMALP00000019033 | ENSMALP00000002043 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | SIX homeobox 2a. | 0.608 |
LOC109958648 | six4 | ENSMALP00000019033 | ENSMALP00000013400 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | SIX homeobox 4a. | 0.608 |
LOC109974331 | LOC109958648 | ENSMALP00000017105 | ENSMALP00000019033 | SIX homeobox 5. | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | 0.608 |
LOC109974333 | LOC109958648 | ENSMALP00000017125 | ENSMALP00000019033 | SIX homeobox 9. | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | 0.608 |
Mre11 | Atm | ENSMALP00000010641 | ENSMALP00000013808 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Uncharacterized protein. | 0.996 |
Mre11 | ENSMALP00000013776 | ENSMALP00000010641 | ENSMALP00000013776 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | TAN domain-containing protein. | 0.969 |
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