STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lemd3LEM domain containing 3. (827 aa)    
Predicted Functional Partners:
banf1
Barrier to autointegration factor 1.
   
 0.904
ENSMALP00000003340
LEM domain-containing protein.
     
 0.862
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.808
LOC109959661
Mothers against decapentaplegic homolog.
   
 
 0.729
smad2
Mothers against decapentaplegic homolog.
   
 
 0.729
smad3
Mothers against decapentaplegic homolog.
   
 
 0.729
SMAD3
Mothers against decapentaplegic homolog.
   
 
 0.729
LOC109962270
RNA binding motif protein 25b.
   
 0.706
ENSMALP00000029565
RNA binding motif protein 25a.
   
 0.706
lmna
Lamin A; Belongs to the intermediate filament family.
   
 0.699
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.