slc26a6 protein (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

slc26a6

Solute carrier family 26 member 6. (701 aa)

Predicted Functional Partners:

Lyrm4

0.576

Mre11

0.535

CYTB

0.519

LOC109971765

0.519

ND4

0.481

ENSMALP00000024688

0.481

gatb

0.463

krtcap2

0.429

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYTB	ENSMALP00000024688	ENSMALP00000000014	ENSMALP00000024688	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Proton_antipo_M domain-containing protein.	0.980
CYTB	Lyrm4	ENSMALP00000000014	ENSMALP00000030730	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Uncharacterized protein; Belongs to the complex I LYR family.	0.932
CYTB	Mre11	ENSMALP00000000014	ENSMALP00000010641	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.724
CYTB	ND4	ENSMALP00000000014	ENSMALP00000000011	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
CYTB	slc26a6	ENSMALP00000000014	ENSMALP00000019838	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	Solute carrier family 26 member 6.	0.519
ENSMALP00000024688	CYTB	ENSMALP00000024688	ENSMALP00000000014	Proton_antipo_M domain-containing protein.	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	0.980
ENSMALP00000024688	LOC109971765	ENSMALP00000024688	ENSMALP00000005467	Proton_antipo_M domain-containing protein.	Heme-binding protein soul4.	0.980
ENSMALP00000024688	Lyrm4	ENSMALP00000024688	ENSMALP00000030730	Proton_antipo_M domain-containing protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.584
ENSMALP00000024688	slc26a6	ENSMALP00000024688	ENSMALP00000019838	Proton_antipo_M domain-containing protein.	Solute carrier family 26 member 6.	0.481
LOC109971765	ENSMALP00000024688	ENSMALP00000005467	ENSMALP00000024688	Heme-binding protein soul4.	Proton_antipo_M domain-containing protein.	0.980
LOC109971765	Lyrm4	ENSMALP00000005467	ENSMALP00000030730	Heme-binding protein soul4.	Uncharacterized protein; Belongs to the complex I LYR family.	0.932
LOC109971765	Mre11	ENSMALP00000005467	ENSMALP00000010641	Heme-binding protein soul4.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.724
LOC109971765	ND4	ENSMALP00000005467	ENSMALP00000000011	Heme-binding protein soul4.	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.980
LOC109971765	slc26a6	ENSMALP00000005467	ENSMALP00000019838	Heme-binding protein soul4.	Solute carrier family 26 member 6.	0.519
Lyrm4	CYTB	ENSMALP00000030730	ENSMALP00000000014	Uncharacterized protein; Belongs to the complex I LYR family.	Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.	0.932
Lyrm4	ENSMALP00000024688	ENSMALP00000030730	ENSMALP00000024688	Uncharacterized protein; Belongs to the complex I LYR family.	Proton_antipo_M domain-containing protein.	0.584
Lyrm4	LOC109971765	ENSMALP00000030730	ENSMALP00000005467	Uncharacterized protein; Belongs to the complex I LYR family.	Heme-binding protein soul4.	0.932
Lyrm4	Mre11	ENSMALP00000030730	ENSMALP00000010641	Uncharacterized protein; Belongs to the complex I LYR family.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.871
Lyrm4	ND4	ENSMALP00000030730	ENSMALP00000000011	Uncharacterized protein; Belongs to the complex I LYR family.	NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.584
Lyrm4	slc26a6	ENSMALP00000030730	ENSMALP00000019838	Uncharacterized protein; Belongs to the complex I LYR family.	Solute carrier family 26 member 6.	0.576