STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
josd1Josephin domain containing 1. (260 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
 0.830
LOC109974756
Uncharacterized protein.
   
 0.812
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.803
cmbl
Carboxymethylenebutenolidase homolog (Pseudomonas).
      
 0.694
LOC109962654
NEDD8 ubiquitin like modifier.
   
 0.615
LOC109974417
NEDD8 ubiquitin like modifier.
   
 0.615
cops5
COP9 signalosome subunit 5.
   
 
 0.612
atxn3
Ataxin 3.
     
0.593
ENSMALP00000007998
Ubiquitin-like domain-containing protein.
   
 0.591
LOC109957006
Ubiquitin like 4A.
   
 0.591
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (24%) [HD]