STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109952690Chromobox homolog 7b. (267 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.878
RING1
Ring finger protein 1.
    
 0.818
eed
Embryonic ectoderm development.
    
 0.774
pcgf6
Polycomb group ring finger 6.
    
 0.720
pcgf2
Polycomb group ring finger 2.
    
 0.718
ENSMALP00000011713
Bmi1 polycomb ring finger oncogene 1a.
    
 0.718
phc3
Uncharacterized protein.
    
 0.714
pcgf1
Polycomb group ring finger 1.
    
 0.581
PCGF3
Polycomb group ring finger 3.
    
 0.570
pcgf5
Polycomb group ring finger 5a.
    
 0.570
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.