STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clcf1Cardiotrophin-like cytokine factor 1. (225 aa)    
Predicted Functional Partners:
LOC109960722
Ciliary neurotrophic factor receptor.
     
 0.925
LOC109956662
Uncharacterized protein.
     
 0.923
il6st
Uncharacterized protein.
     
  0.902
ENSMALP00000015992
Cytokine receptor-like factor 1b.
     
 0.601
LOC109968040
Cytokine receptor-like factor 1a.
     
 0.601
rab35
RAB35, member RAS oncogene family b.
   
 0.559
LOC109952708
Si:dkey-16l2.16.
   
 0.559
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
   
 0.559
arl15
ADP-ribosylation factor-like 15a.
   
 
 0.481
ENSMALP00000009480
ADP-ribosylation factor 6b.
   
 
 0.481
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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